rs30910998 SNP Detail

Summary

• ID
  rs30910998
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135870414 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGGAGGGG ATGTTCAACA
  GTATACATGC CATATAACTG GTACATTTTT CCCCTGGAAG TCCAGGTCCT GTAAGACCCC
  AGCCTGGTCT CCTCCTGGGC AAGGGGTAGT CCTTCCTGGT TGTGTCAAAT GAGGCCTCCC
  GGGTGACACC TCTCTGGGGG ATGCCAGGTT TCGGGTAGGT CTACTAGCTA CAGCCAATAG
  R
  AAACAAGCAT GCCACACCTG TGTTATCTGG AACAGGTGAG ATCGCCCCTA CTCTGTCCTC
  CCTGAGCCAA ACCCATCTTC TGCCCTCTCT GACCTCTCAT AACTGCTGTG ACGAGGCATA
  GATGGCCCTG CCATCTGCCC CCTTATGAGC TGTCCTGTAA CTGTATGGCG TTCAGCCTTC
  CCGGTTCCTA GAAGGAGGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49682765	NES12985394	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30910998					SNP	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49682765	NES12985394	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135870414 () rs orientation: forward

Symbol	Name	Function Class
Gm71005	predicted gene, 71005	1487 bp downstream
Rr419320	regulatory region 419320	within coordinates
Rr419321	regulatory region 419321	1983 bp proximal