rs30911680 SNP Detail

Summary

• ID
  rs30911680
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:67385305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAGGAAAT ACTTCACTGG
  TATAATGTGT TGTATCAGCA ATGCAAAGAG CTACCTTCTG CAATGGGATA ATTCCAACAT
  GTCACAATTC ACTCTTTTTT GGTGACTGCC AAATTTAAGA TTCCATATGT TGAAATACTA
  AAGCTGAAAT ACCTTATAGG AGGCTGTTAA AAGAACAGTT AGCATTCTTA GGACAGCAGC
  R
  TGCTATAATG TCCATAGTGC TCATAGGATC TCTGTTGAAA GGTCATTTAG GGAACTTGGG
  TTAGGAAACC TGTCTGTTGG CTTGAGTTTG GCTCAACGCA GTCATTCTAT ATTGCTTCTT
  GGGTGTCTTT AAAGAGTACT TGGTCTTCAC TGTTGCCCAG GCGGGAGAGC TTCCGTGCCT
  CCTTCAAGGA TTATGCAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46996565	NES10782975	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30911680					SNP	A	A	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46996565	NES10782975	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67385305 () rs orientation: forward

Symbol	Name	Function Class
Gm42568	predicted gene 42568	within coordinates
Rarres1	retinoic acid receptor responder (tazarotene induced) 1	1000 bp downstream