rs30912522 SNP Detail

Summary

• ID
  rs30912522
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:67385876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCGGAAT ATACTATCCG
  AGACTCTGGA AATTTGGGAC AGTAGCAGCT GGACACAGCT CTGCCAGCCA CGTGAGCATT
  ACGGTGAAGA GCAGTCTATG ATGTCGCTAA ACTGGGCTGT TTAGGTCAGG TGTACTAACT
  GCATTTCAAG TCTCTGGTAT TTTCAACTCT AGGTGGGCAG ACTGGGACAT GACCTCATCC
  R
  TCGTAAGGCT GCTTCTGGAT GCTTTTTTAT TTTGAGGCTG ATGCCTCCCA ATCACTCAGT
  GGCCCAAGAA CCTGGCTTAA GGGCTTAAGA CAATGACATA AGTGTTCCAT TAAATTTTAA
  TAATTGTGAG ATGGCGACAT TCCCTGGGTG AGTTCTTCCC GTCCTGAGGA GGTTCGTCAC
  TCAATTTGAT CATTACATAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46996577	NES10782933	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30912522					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46996577	NES10782933	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67385876 () rs orientation: forward

Symbol	Name	Function Class
Gm42568	predicted gene 42568	within coordinates
Rarres1	retinoic acid receptor responder (tazarotene induced) 1	429 bp downstream