rs30913334 SNP Detail

Summary

• ID
  rs30913334
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:117539617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTTGCAAGT AGTATACATT GTATATAGAA CATTAGTAAG
  ACAAGACTGA GCGTCTTGCA TGTGTGGTTA GGTCTAAGGG CATTGTCCCT TATGAGTTCA
  S
  TGATGAGAAG AGATGGGTTT GTGTTTATTA TGTTGCATTA AAGAATCAGA CACACTTTCC
  CACTCTTCAG AAAGGGAGAT GGAGGTGAGG ACCTTGTCT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46457144	mCV24240499	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss138890323	ENSMUSSNP2468878	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30913334					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:117539617 () rs orientation: forward

Symbol	Name	Function Class
Gm54711	predicted gene, 54711	1550 bp downstream
Rapgef5	Rap guanine nucleotide exchange factor (GEF) 5	within coordinates