rs30913714 SNP Detail

Summary

• ID
  rs30913714
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:157658660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGTTGACTT CTTGTCTGGT TACTATTTAA CTTCATTGTT
  CATTAGCTTC TTCAGTTTGG ACTGATCTTT GGTAAACTTT TTGCTACATA TTGCTTTTTC
  Y
  TTGATAAAAT GTTGAAGTAT AGCCTCTAAT TATGTTCAGA AGAACTGTAT GCTGGGCTTA
  TGAATAGAAG TTAAATATGA CAAAATATCT CCATCTTTTG                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47496876	NES10303876	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30913714					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47496876	NES10303876	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:157658660 () rs orientation: forward

Symbol	Name	Function Class
Ankrd13c	ankyrin repeat domain 13c	within coordinates
Rr66599	regulatory region 66599	341 bp proximal
Rr66600	regulatory region 66600	1141 bp proximal
Rr71372	regulatory region 71372	541 bp proximal
Rr71373	regulatory region 71373	1341 bp proximal
Rr80064	regulatory region 80064	within coordinates