rs30914262 SNP Detail

Summary

• ID
  rs30914262
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:67386977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCTGGGTA CCAGACCAAG
  TGAATACGGC AGGGAATGAT TTCCTAGGAG GTAAAGGAAT AAATATTATA AACTTGAAAA
  ACTTAAAATG AAAACAATTC GATACACAAC TTTGCATCTT ACCTGTGTGG AGAATTCATG
  AAGCAGAACA GTGAAGTCAA AGTCGATGCT GTCATCATCC GTTTTCTAGA GAAAGGAAAA
  S
  GTTAGTATAA CCAACACGGT GGGATTCTGT AAGCTCAGGA TTCCCGAGGC TTTGTCATGT
  GACCCCTGTG GGTGGTGCCT TATCGCTTCT GCTGAGACAC CATGGGGATG CTCCGGCCTA
  AGTTCTAGAA GTCACAGGTT CTGTCACTCC GTTCCATGAA AGTCTGGTGA AAGTCCTTTG
  TTAAAGCCTT TTCTCCCTGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46996599	NES10782944	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30914262					SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46996599	NES10782944	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67386977 () rs orientation: forward

Symbol	Name	Function Class
Gm42568	predicted gene 42568	826 bp downstream
Rarres1	retinoic acid receptor responder (tazarotene induced) 1	Intron