rs30920473 SNP Detail

Summary

• ID
  rs30920473
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:75422791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCAG GGCTATACAG AGAAACCCCC
  R
  TCTCGAAAAA AACAAAAAAA CAAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39235550	mCV22627163	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss139749966	ENSMUSSNP3050099	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss324673329	CHEV_14_75585158	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30920473					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:75422791 () rs orientation: forward

Symbol	Name	Function Class
Lcp1	lymphocyte cytosolic protein 1	within coordinates
Rr495439	regulatory region 495439	471 bp proximal
Tssr4481	transcription start site region 4481	453 bp downstream
Tssr4482	transcription start site region 4482	522 bp downstream
Tssr126634	transcription start site region 126634	1930 bp upstream