rs30921008 SNP Detail

Summary

• ID
  rs30921008
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:139369185 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTTTCCAT TATATTTATA
  TGATTTATAT TTATATTTTT GGTTCATTGC AAATTTAAGA AATCTCCATA GATGAATCTA
  TCTTAAAATA CAAAGATCTG AAAATGTTCA GGTCCCTTTT CTAGGTAGCT AAGTAGCACA
  TCTGAATTTA ATGTGTGTTC ATTCAAAGTG GTTTATATCT AGATGTATTT CTAATCAATA
  Y
  CATAGGTTTG AAGTAAGTTT TTATCTTGTT CTCTTACATT GAAAGGAAAA GTTAGATGCT
  TACCACAGAA AGTTACTAAT TTCTTTTCCA CATGATCAAA ATATCCACAT TATAAAATTA
  GGCATAGGTT CTTTGGGAAA GATACTTACG TCAGTGATAT TTAGGAAACG AGCCAGATTA
  AAGGATAACT TTTTTCTCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49683644	NES12979309	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30921008					SNP	T	T	T	T	T	T	C	T	T	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49683644	NES12979309	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:139369185 () rs orientation: forward

Symbol	Name	Function Class
Gm70730	predicted gene, 70730	within coordinates
Zbtb41	zinc finger and BTB domain containing 41	within coordinates