rs30923254 SNP Detail

Summary

• ID
  rs30923254
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116991911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCGAGAAAA ACAAAACAAA ACAACCCTCA GAGGGAAGGG
  GCATCAATCT TTAACATGTT TTTGCATTTT ATTTTTAATT AAATATTAAG AAAACATATT
  W
  GACCTGATAA TGTCCGTCAA AAGGGTTAAA CTAATTAACC GACTTGTTGC CAGGACTGAG
  TTATTTAAAT GAGTTTGAAA GAGGCAGGGT TACATTTCAC                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss47996795	NES11997534	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs30923254					SNP	T	T	T	T	T	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47996795	NES11997534	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116991911 () rs orientation: forward

Symbol	Name	Function Class
Gm53635	predicted gene, 53635	1223 bp upstream