rs30923258 SNP Detail

Summary

• ID
  rs30923258
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116991986 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGGGCTAT ACAGAGAAAC
  CCTGTCTCGA GAAAAACAAA ACAAAACAAC CCTCAGAGGG AAGGGGCATC AATCTTTAAC
  ATGTTTTTGC ATTTTATTTT TAATTAAATA TTAAGAAAAC ATATTAGACC TGATAATGTC
  CGTCAAAAGG GTTAAACTAA TTAACCGACT TGTTGCCAGG ACTGAGTTAT TTAAATGAGT
  K
  TGAAAGAGGC AGGGTTACAT TTCACCTTCA TTGATTTTGT TTGTTTGTAT GTATGTTTGT
  TTGTTTGTTT GTTTTTTAAA TTAAAGTGTT GGCCCAGGGG CCAGCAAGAT GGCTCACTGG
  GGAAGGGTGT GTGCCTGATC ACCAGAATTT GATACCTAGA GCAGACATGG TGTGAGGGGT
  GTCCTCTGAT CCCTCGCTCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47996799	NES11997537	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	G	T	T	T		G	T	G		T
ss323494367	CHEV_10_116593137	CHEVERUD	SCREENING_POP	f	SNP								T				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30923258					SNP	T	T	T	G	T	T	T	T	G	T	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47996799	NES11997537	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116991986 () rs orientation: forward

Symbol	Name	Function Class
Gm53635	predicted gene, 53635	1148 bp upstream