rs30923260 SNP Detail

Summary

• ID
  rs30923260
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116992355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGTGAGGG GTGTCCTCTG
  ATCCCTCGCT CCCCGGCATA CACACACACA CACACACATA AACACATACA CAACCTATAT
  CTTTCACTTT GTTTTTAAAA TGGTCACCCA TCTCTCTCTG CCTCAGCTCC TCCTCCAAAA
  TACACACGAT ATCATAGAGA TGTTTTGAGA CATGGCTAAT AAATGATTAT AAAGCGCAGG
  K
  CTTTGAAGTA TAAAGCACTG CATAATTACT AAATACTATA ATAACCATGC TCATAATAAC
  AGTAATTTTC AACCAACAAC CAGCCCCAGA TGCCTTTAGT CACCTCCCAA TTAGACAAAA
  GTGTATATGC CAACTATGAA ATAAAGTCAA AATCATAAAC CACAGACCAG TTCCATTCTC
  TCTCTCTCTC CTCTGCAGAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss47996801	NES11997524	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G		T	T
ss323494372	CHEV_10_116593506	CHEVERUD	SCREENING_POP	f	SNP								G			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs30923260					SNP	G	G	G	G	G	G	G	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47996801	NES11997524	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116992355 () rs orientation: forward

Symbol	Name	Function Class
Gm53635	predicted gene, 53635	779 bp upstream