rs30923262 SNP Detail

Summary

• ID
  rs30923262
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116992702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAAATCAT AAACCACAGA
  CCAGTTCCAT TCTCTCTCTC TCTCCTCTGC AGAATCCCAA GTTACACTGC CAGAGAGAGG
  CGGCTTAGCC CTGTGTGACC CTAGCTGTGC GACCAGTATG TGCAGGGCAA ACTTCTCTGG
  CCAGTTTCTT TTATTTTAAA ATCACATTTA TTTAGCTTGT TGCTGGAAGT AGGCATTTTG
  Y
  CCCGCAGTGC ACATGAAGAG ACCAAAGGAC AATTTGAGAG AGAGTTAGTA TCTCTTCCAC
  TCACGACGTA GGGCCCAGGG ATAGGGCTTA GATCTTCCGT CTTGACATCA GGAACCCTTA
  CCACTGAGCC ATCTTACCAG CTGGTGGCCT GTTTCTTTTT TTTTTTTTCA AGTTTTTAGA
  TCTCATTTTA TTGTATGTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss47996803	NES11997525	PERLEGEN	MM_PANEL2	f	SNP	T	C		T	T		C
ss323494375	CHEV_10_116593853	CHEVERUD	SCREENING_POP	f	SNP			C			T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs30923262					SNP	T	C	C	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47996803	NES11997525	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116992702 () rs orientation: forward

Symbol	Name	Function Class
Gm53635	predicted gene, 53635	432 bp upstream