rs30924193 SNP Detail

Summary

• ID
  rs30924193
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116994472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCTCTGCC TCCTATGCTG
  GGATTAAAGG CATGTGCTTG GCACGCTTAA AGACCACGCT TGGCAAAACA AAATGAAAGT
  ATTTACCAGA AGCCATAAGC TCTTTAGAGA TTAGGCTCAT TCTTCAGATG TTAATGCCAG
  CTTGCTCTGA GGCTGGAGAC AGAAACTTGC CTAGCGTGTG CAAGGCCCAA GCTTAATCTG
  Y
  AGCACTTGAA CAACACACAC ATGGCAAGTT ACAGACATGC TGGAGCTTGC TTTGTGAGTG
  GGACATGTGC ATTCATATTT ATAACTATGA ATCTAATTGT TTATGCATGC TTGTCTTTTG
  GTAAATAGTT TTGCTTTATT TTTGTTTTAG AAATTAAGTG TCTTCTTTTA TAGCCCGGCC
  TGATATCAAA CTCTTAACCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47996815	NES11997449	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T		C	T	C		T
ss323494388	CHEV_10_116595623	CHEVERUD	SCREENING_POP	f	SNP							T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30924193					SNP	T	T	T	T	T	T	T	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47996815	NES11997449	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116994472 () rs orientation: forward

Symbol	Name	Function Class
Gm53635	predicted gene, 53635	within coordinates
Gm67187	predicted gene, 67187	1581 bp downstream