rs30926772 SNP Detail

Summary

• ID
  rs30926772
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138288863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAGTACAG TTTTGGTGGA
  AATTGAATTT TGCAGCAGTA TACACAACAT TTGTGAAGTT CTGTGTGTCT TGTAAAAGAC
  TCTCCCAGAG CTGCCAAGAG AGTCCTTATA CTCTGAATTT GGACTGAATC TGTATTCACA
  TACTGAGGTA GGAGGATGTG AGGCATGAAG GAATTGGGAG GTGCCTTTAG GACTTAATGA
  Y
  ATTGTCCAGA CCTGTCAGCC TAGGAGCTTT AGGTGACAGA TAAACAGTCA CCAGCAAGAT
  AAAGGGAGGG TGCTTGGGTG AAAGACATGA AATGTCTGTT AAGTTTCTGA GAAGTTCTTA
  GAGCCTCTTT GTCTGGAAGC ACTCTGCCTC CTGAGTCATT TCCTGTCACC TCTACTCCTC
  AGTGAACAAA GTGACTGTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46998404	NES10885203	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30926772					SNP	C	C	C	C	C	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46998404	NES10885203	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138288863 () rs orientation: forward

Symbol	Name	Function Class
Gm66723	predicted gene, 66723	within coordinates
Rr586166	regulatory region 586166	300 bp proximal