rs30927831 SNP Detail

Summary

• ID
  rs30927831
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138289064 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTC AGTGAACAAA GTGACTGTAC
  R
  CTCTTTGTGT CTAACTATTT TTATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J	WSB/EiJ
ss45503888	mCV22628108	ABI	CRAMUS_MOUSE	f	SNP	A	G			G		A
ss46998414	NES10885208	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G		G	A	G		G	A		G
ss135954771	ENSMUSSNP3371492	ENSEMBL	ENSEMBL_Sanger	f	SNP		G					A
ss320980472	CHEV_3_138246267	CHEVERUD	SCREENING_POP	f	SNP									G			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J	WSB/EiJ
rs30927831					SNP	A	G	G	G	G	G	A	G	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46998414	NES10885208	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138289064 () rs orientation: forward

Symbol	Name	Function Class
Gm66723	predicted gene, 66723	within coordinates
Rr586166	regulatory region 586166	99 bp proximal