rs30929501 SNP Detail

Summary

• ID
  rs30929501
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117114680 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTAGGCCT TAGCCACACT
  GCTTATATCA ACAGAGCCAG CCATTCCCCT TCCAATGTTT TAACCTACCA TGCTCGAATG
  CCTTGGGGAT CTCTCACCAC CCTCTTTGCA CATTGTATGG CTGCAGTGAT GTCATCCTGC
  AGCAGAGCTG AAAGACAAGG GTGAGGAGTG ACAAGGACAG TTATAGAACC ACTTCAGGTC
  R
  GATCCAGCCA GCCTTCTCTG TAACAGGGAG CACTGAATAT AGGGAATTAC TTCCCAAGTA
  TCTGTGCATC TGTTATTATT GGAGACAGCC TCCTGCTTCT CTCACAAAGC CATGCCTGCA
  GTAACAAATA CTGACCTGAA TTCTCCTCTT AAAGAGAGAA TAACATTATG GTAGCAATAT
  TCTGTGCTTG AAAACAACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	WSB/EiJ
ss47997501	NES11997400	PERLEGEN	MM_PANEL2	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	WSB/EiJ
rs30929501					SNP	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47997501	NES11997400	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117114680 () rs orientation: forward

Symbol	Name	Function Class
Gm67237	predicted gene, 67237	within coordinates
Lyz2	lysozyme 2	within coordinates
Tssr95904	transcription start site region 95904	1435 bp downstream
Tssr95905	transcription start site region 95905	1367 bp downstream
Tssr95906	transcription start site region 95906	1313 bp downstream
Tssr95907	transcription start site region 95907	1280 bp downstream
Tssr95908	transcription start site region 95908	1099 bp downstream
Tssr95909	transcription start site region 95909	1009 bp downstream
Tssr95910	transcription start site region 95910	863 bp downstream
Tssr95911	transcription start site region 95911	755 bp downstream
Tssr95912	transcription start site region 95912	684 bp downstream
Tssr95913	transcription start site region 95913	607 bp downstream
Tssr95914	transcription start site region 95914	1859 bp upstream
Tssr95915	transcription start site region 95915	1937 bp upstream
Tssr99410	transcription start site region 99410	1323 bp upstream
Tssr99411	transcription start site region 99411	1245 bp upstream
Tssr99412	transcription start site region 99412	1139 bp upstream
Tssr99413	transcription start site region 99413	1086 bp upstream
Tssr99414	transcription start site region 99414	972 bp upstream
Tssr99415	transcription start site region 99415	912 bp upstream
Tssr99416	transcription start site region 99416	845 bp upstream
Tssr99417	transcription start site region 99417	770 bp upstream
Tssr99418	transcription start site region 99418	751 bp upstream
Tssr99419	transcription start site region 99419	713 bp upstream
Tssr99420	transcription start site region 99420	655 bp upstream
Tssr99421	transcription start site region 99421	579 bp upstream
Tssr99422	transcription start site region 99422	130 bp downstream
Tssr99423	transcription start site region 99423	1892 bp downstream
Tssr99424	transcription start site region 99424	1960 bp downstream