rs30930384 SNP Detail

Summary

• ID
  rs30930384
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:117114809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCACTGAAT ATAGGGAATT ACTTCCCAAG TATCTGTGCA
  TCTGTTATTA TTGGAGACAG CCTCCTGCTT CTCTCACAAA GCCATGCCTG CAGTAACAAA
  Y
  ACTGACCTGA ATTCTCCTCT TAAAGAGAGA ATAACATTAT GGTAGCAATA TTCTGTGCTT
  GAAAACAACA TGCTGTAGTC TTTGGTCTTA AAGCAGCTGG                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss47997505	NES11997402	PERLEGEN	MM_PANEL2	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs30930384					SNP	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47997505	NES11997402	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117114809 () rs orientation: forward

Symbol	Name	Function Class
Gm67237	predicted gene, 67237	72 bp downstream
Lyz2	lysozyme 2	Intron
Tssr95904	transcription start site region 95904	1564 bp downstream
Tssr95905	transcription start site region 95905	1496 bp downstream
Tssr95906	transcription start site region 95906	1442 bp downstream
Tssr95907	transcription start site region 95907	1409 bp downstream
Tssr95908	transcription start site region 95908	1228 bp downstream
Tssr95909	transcription start site region 95909	1138 bp downstream
Tssr95910	transcription start site region 95910	992 bp downstream
Tssr95911	transcription start site region 95911	884 bp downstream
Tssr95912	transcription start site region 95912	813 bp downstream
Tssr95913	transcription start site region 95913	736 bp downstream
Tssr95914	transcription start site region 95914	1730 bp upstream
Tssr95915	transcription start site region 95915	1808 bp upstream
Tssr99410	transcription start site region 99410	1452 bp upstream
Tssr99411	transcription start site region 99411	1374 bp upstream
Tssr99412	transcription start site region 99412	1268 bp upstream
Tssr99413	transcription start site region 99413	1215 bp upstream
Tssr99414	transcription start site region 99414	1101 bp upstream
Tssr99415	transcription start site region 99415	1041 bp upstream
Tssr99416	transcription start site region 99416	974 bp upstream
Tssr99417	transcription start site region 99417	899 bp upstream
Tssr99418	transcription start site region 99418	880 bp upstream
Tssr99419	transcription start site region 99419	842 bp upstream
Tssr99420	transcription start site region 99420	784 bp upstream
Tssr99421	transcription start site region 99421	708 bp upstream
Tssr99422	transcription start site region 99422	1 bp downstream
Tssr99423	transcription start site region 99423	1763 bp downstream
Tssr99424	transcription start site region 99424	1831 bp downstream
Tssr99425	transcription start site region 99425	1876 bp downstream