rs30931504 SNP Detail

Summary

• ID
  rs30931504
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:142593507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATTTACAT ATTTGCTTTT
  ATTTTGAAAT CTTAGAAATA CAAAAGGACA GTTCTCAATA TCCATAGCCT TTGTCTTCAA
  GGATAGCCTT TCTATGTGCC AAACATGACA AAAGGTTTGT ATATATTTAG GTTTTAGTAT
  AGTACCATAG GCTGCTGTTC ATAAATATTT TAATTGATAA GGCAACATTA AAATCTAACA
  M
  AGTTACAAGA AAATAGTTTT AAATATCGGG TTTTATTGTC TAAAATGTTT CCAAGAGTTT
  CATATCCATC TAAAGATTTA AGTGTGAACT ATAAAGATAC ATTGTGGATG GTTTATTTCT
  AGTTTCCCCT AACCTGAATA CTGTGTCTCA AAACTGGGGA CTAAACTTCC ATAAGATTTC
  TGTGAGCATG AAACACATGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss49686110	NES12984088	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs30931504					SNP	C	C	C	C	C	C	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49686110	NES12984088	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:142593507 () rs orientation: forward

Symbol	Name	Function Class
Rr372162	regulatory region 372162	562 bp upstream