rs30931506 SNP Detail

Summary

• ID
  rs30931506
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:142593139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGCATTAAG CCAAACACAA
  ATATTTTACT AGACATAATG TTTTATAAAA TGTAAACAGA AATTGTGAAG AAGCTCATTA
  CAGTTACATC CTAAAAAGAT ACATGAGCTG AAAAGCAGAC GCTTTAAAAT AGCTTTCCTG
  TTGGGTTAGA AAAGCATGTG GCTATTCTTG CATAACACAG AAAGGCCATT ATGTCGACAC
  R
  AATAAATTCT TTCAATGTGA AAACCCTGCA ACTTGCCATG TGGCAGTTGG ATTCATGAGG
  CAATTGGAAA ATCTATTGTG TGTGACGACA TGGAAGCTTC CTCCTAGCTA TCCATGTGAG
  ACCAAGTCAT TTCCTCTCAG CATCCCATTT CCCTCTGGTC TCTAAAAACA TTTACATATT
  TGCTTTTATT TTGAAATCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss49686112	NES12984086	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs30931506					SNP	G	G	G	G	G	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49686112	NES12984086	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:142593139 () rs orientation: forward

Symbol	Name	Function Class
Rr372162	regulatory region 372162	930 bp upstream