rs30931831 SNP Detail

Summary

• ID
  rs30931831
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:106864166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGTGAGCG CTACCAGGTA
  TCCACTGGAA GTCGGTGAGA GAGATCCGTT GGGGAAAGGG AGGGAGGTAA AGATCAAGGG
  TTCTTAGAAC TGTGGGCGGT CACTAGAGAT CACAGAGAAG GACGTGCCCA TACAGGTGTC
  GGGTCGGCGT AGTGCCGGCA GTGCAAGGCG CACGTTACTG TGGACCTGAA GGCTCAGGCC
  K
  TGGTGCCAAG GTAGGAAAAT CGTGCTTAAA CTTTAGAGAG CTGTATCCTA AATGAAGCCG
  TGTCTGCTGG TAGAGATCTG GAAGTTCAGC CTACCAACCC CACTTGGGGT TTGCCTGCTT
  GTTTTTGTCT CTCTTGGATG ATGATAGAAG TGTTATCTGG CTATTGAAAG CACTCCAGCA
  GAGAGCGGCT AGAGTTGAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss47499461	NES11205705	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	G	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs30931831					SNP	T	T	T	T	T	T	T	T	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47499461	NES11205705	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:106864166 () rs orientation: forward

Symbol	Name	Function Class
1810019D21Rik	RIKEN cDNA 1810019D21 gene	within coordinates
Cpgi20965	CpG island 20965	within coordinates
Cpgi20966	CpG island 20966	476 bp proximal
Esrp2	epithelial splicing regulatory protein 2	560 bp upstream
Rr185913	regulatory region 185913	within coordinates
Tssr79223	transcription start site region 79223	1964 bp downstream
Tssr79224	transcription start site region 79224	1645 bp downstream
Tssr79225	transcription start site region 79225	1581 bp downstream
Tssr79226	transcription start site region 79226	460 bp downstream
Tssr79227	transcription start site region 79227	874 bp upstream
Tssr82757	transcription start site region 82757	658 bp upstream
Tssr82758	transcription start site region 82758	633 bp upstream
Tssr82759	transcription start site region 82759	139 bp upstream