rs30932270 SNP Detail

Summary

• ID
  rs30932270
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:12502916 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  AACAGTCTGT TTTGTGGGAA CACTTCATGA CCGTGACCCG CAGTTCTGGT TCCGGAATGA
  GGGATCTTCC TTGCGCCGGT GATGGTTAAC TCCCGTCCCG AGTTTTCTTG TCCCGGGTTT
  TTTCTTCCCG GATTTTCTCG TCCCGGATTT CGGCACCAAC TCTTACACGC GTTCACGCGA
  CCGGCCAGGA AAGACGCAGC AAACCAGAAT CTTCTGTGGC AAAACTTTAT TGCTTACATC
  TTCAGGAGCA AGAGTGCAAG AGAGCAAGCG CTCTATTGCT TACATCTTTA GGAGCCAGAG
  Y
  GCAAGAGCGC AAGAGCTTTA TTGCTTACAT CTTCAGGAGC AAGAAGCAAG AGCCAGAGCA
  AGAGAGAGAA TGGGGAAACC CCGTCCCTTT TTAAGGAGAA TTATTCTCCG CCTAGGACGT
  ATTACTCCCT GATTGGCTGC AGCCCATCGG CCGAGTTGTC GTCACGGGGA AGGCAGAGCA
  CATGGGGTGG AAAACTACCC TTGGCACATG CGCAGATTAT TTGTTTACCA CTTAGAACAC
  AGGATGTCAG CGCCATCTTG CAACAGCGAA TGTGAGGGCG GCTCCCCACA GGTGTTCTGG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss39236489	mCV23674775	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs30932270					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:12502916 () rs orientation: reverse

Symbol	Name	Function Class
Map3k4	mitogen-activated protein kinase kinase kinase 4	within coordinates
Rr392297	regulatory region 392297	within coordinates