rs30939271 SNP Detail

Summary

• ID
  rs30939271
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87156523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAG AGAACCATCT AGAAGGAGAC
  R
  GCATAGGGAA GGCCAGTGGG GGAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45482107	mCV24901006	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss135456766	ENSMUSSNP5457383	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30939271					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87156523 () rs orientation: forward

Symbol	Name	Function Class
Fcrl2	Fc receptor like 2	1795 bp downstream
Rr579465	regulatory region 579465	1533 bp distal
Tssr33932	transcription start site region 33932	443 bp downstream