rs30941601 SNP Detail

Summary

• ID
  rs30941601
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63642538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCACACTGG AGGGCAGAGA TGCATGGGCA GCAGAGGAAA
  CAGGGCATAA GCCCAGGAGA AGCTGGAGAT TTCATCAATG ACACCAGGAT GGCCCACTGC
  K
  TGCTTTGAAG AGCCGACATA CCTTTTACAA AGATCACTGC AGCTGCTGTG TGGAGAAGAG
  ACTGGAAGTG AGAGCCGAAG GCAGGGGTCC TTGGCAGGAG                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss49187571	NES12487773	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs30941601					SNP	T	T	T	T	T	T	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49187571	NES12487773	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63642538 () rs orientation: forward

Symbol	Name	Function Class
Blk	B lymphoid kinase	within coordinates
Tssr129184	transcription start site region 129184	139 bp downstream
Tssr129185	transcription start site region 129185	162 bp downstream