rs30941849 SNP Detail

Summary

• ID
  rs30941849
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52474602 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAA AGTGGCGTCC TGCTGGCAGT
  R
  CTCACCCTCT GGCTTGGAAC TTAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45481439	mCV24464014	ABI	CRAMUS_MOUSE	f	SNP		G					A		A
ss60409002	NES15911288	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A		G	A	G	G		G	G	G	G		G
ss135177051	ENSMUSSNP3345537	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							A
ss320764489	CHEV_3_52371103	CHEVERUD	SCREENING_POP	f	SNP												G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30941849					SNP	G	G	G	G	G	A	A	G	A	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60409002	NES15911288	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52474602 () rs orientation: forward

Symbol	Name	Function Class
D3Mit364	DNA Segment, Chr 3, Massachusetts Institute of Technology-364	822 bp distal
Rr576544	regulatory region 576544	280 bp proximal
Rr576545	regulatory region 576545	1470 bp proximal