rs30943566 SNP Detail

Summary

• ID
  rs30943566
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:112263109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTA GTGGCCAACT TTAAAAAAGA
  R
  TTTTACTTAA GCATGTTTAT GGGTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45980187	mCV22277634	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
ss133559951	ENSMUSSNP6984136	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30943566					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:112263109 () rs orientation: forward

Symbol	Name	Function Class
5031434C07Rik	RIKEN cDNA 5031434C07 gene	within coordinates
Lmcd1	LIM and cysteine-rich domains 1	within coordinates
Rr636320	regulatory region 636320	1551 bp proximal