rs30947050 SNP Detail

Summary

• ID
  rs30947050
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55207677 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGTCAAAA GCCTTGCAAA
  TGGAAGTCAC AGAGGGGACG TGAAGGAAGA AATGAATACT GCAGACCAGG GGGTGTGTCC
  TGGGAGGATG GGGAGGAAGA AAGATAGGCT AAGGTTACTG TCCTCCTGGC TAAGTGGAAG
  GGGCAAGGGA CACTGTGGAT AGCTGTGTTT GGAATGTCAC TTGACTACAT CTCTCATCCC
  R
  TGTCCTCTCA GAGACCTGCC TGGGATGGGA TCTAAGGGGA CATTACTACA TCTGCTGAGG
  GGGTCATACC TTTGCCGACT GAAAAGTCAC TGGTCAGTTC CTACACCCCA GGACTTCTGT
  GGCCCAGCTC TGCATATTAT CAGCGTAGGA TACTAACTAG CAGTGGCACC TAGGTGCTTG
  CTTGGTGGAT GAGCTTCAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39238093	mCV23144757	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss139574387	ENSMUSSNP1958956	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss324641244	CHEV_14_55589057	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30947050					SNP	A	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55207677 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	within coordinates
Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta	464 bp downstream
Rr492380	regulatory region 492380	1415 bp distal
Rr492381	regulatory region 492381	59 bp distal
Tssr125718	transcription start site region 125718	1537 bp downstream
Tssr125719	transcription start site region 125719	1445 bp downstream
Tssr125720	transcription start site region 125720	1420 bp downstream
Tssr125721	transcription start site region 125721	1408 bp downstream
Tssr125722	transcription start site region 125722	960 bp downstream
Tssr125723	transcription start site region 125723	918 bp downstream
Tssr125724	transcription start site region 125724	878 bp downstream
Tssr125725	transcription start site region 125725	37 bp downstream
Tssr125726	transcription start site region 125726	13 bp downstream
Tssr125727	transcription start site region 125727	5 bp upstream
Tssr125728	transcription start site region 125728	813 bp upstream
Tssr125729	transcription start site region 125729	1687 bp upstream
Tssr128753	transcription start site region 128753	1860 bp upstream
Tssr128754	transcription start site region 128754	1790 bp upstream
Tssr128755	transcription start site region 128755	495 bp downstream
Tssr128756	transcription start site region 128756	512 bp downstream