rs30947940 SNP Detail

Summary

• ID
  rs30947940
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70349599 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCCATTTGG TAAACAGGAA GGAGTCACTG GAACACATGG ATAAGACAGA AATTTCTGGC
  AGATTGATTG TGAAAGACCC AACAAAGATA GCAGAGCTCA TGATGTGTCT CCTACAAGGA
  CATCAGTGAC AGAATGGTGA CTGTCACTCG CTCCAAGAGC ATGAGATAAA CCACTCTACA
  AAAAATCTTG CACTATGCAC TGGAGTCTTA CAGTTTATTT ACAAAAGAAA TGTGGGATTT
  TCCTAAGTTT TACAGCAATG TTAAATTTTA TATTTATACA TTATTAGTTA GCAGGGAAAC
  R
  CTTTATTTCT AAATTGTAAG TAGCAGAAAA CTAATTCAGT TAACTCTGAG AGGAAAAACC
  GGAATTCACT TTTCCCTTGA GAAAATGATA CTGACTCTGG CGCGCGAAGA GACAAAGACC
  GAACAGCCAG GAGAGGAATA AAGACACAGA AGTGTGCAAG CAGATGAGTA AGAAAGACGC
  AGGTTATCCT CGATTTTCCG TTCCGTTTGT TTACTTCCAA TTTTTATCTT TGAAGCCTTT
  TTTTACACGT AAGTTTTCAC TTTCACATCT ATTTATATAT TTTTTTTCTT TAAAAAGGGA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39239026	mCV24339214	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30947940					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70349599 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bin3	bridging integrator 3			Intron
				Noncoding-Transcript-Variant
Rr494844	regulatory region 494844			1046 bp distal
Rr494845	regulatory region 494845			1064 bp distal