rs30949429 SNP Detail

Summary

• ID
  rs30949429
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:128175519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTGTCCTGA GTACTAGGGT TAAAGAAGGT TGATACCATG CCTGGCATAA TAAGAGCTCT
  GAACCATGGA GCCATCTCTC CAGCCCTCTG TATTGTCTTT CCATTTGCTT CTTCAGGTAG
  TGCCATTATG TAACCCAGGC TCTTGTCCTG CTGTACTGAG TTCTGGGATG ACAGACATAC
  ACCCTGTACC TGGGCCATTT TACTTTCTTG ACAATGGTTA TATTAGTCTG GGAGGGCAAC
  CATATGATAT CATTGGGGAT TTTTCTTGAT ACATATATAT GTGTGTGTAT ATATATATAT
  R
  TATATATATA TATATATGTA TATGTGTATA TATACATATA TATGTATATA TATATAAAAC
  AAGGTTTCAT ATAGCCAAGC CAGGCCTCAA ACTCACTATA TCCATCTCTC TTTCTCTCTC
  TCTCTCTCTC TCTCTCTCTA TATATATATA TATATATATA TATATATATA TATATGCAAG
  AATGGCCTTG AATTTGTCAT TCTCATACCT CTATCTTGCA AGTGCTGGAA TTATAGATAT
  ATATGGCACT GTACCAGGCT AACATATAAG TTTTTAAGGA ACCTAATTCA ATCCATAACA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45981800	mCV24158446	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30949429					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:128175519 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18048	CpG island 18048	1479 bp proximal
Gm10010	predicted gene 10010	within coordinates
Gm66766	predicted gene, 66766	1748 bp upstream
Rr399953	regulatory region 399953	1951 bp upstream
Rr639207	regulatory region 639207	1365 bp proximal
Rr639208	regulatory region 639208	1759 bp proximal
Tssr63410	transcription start site region 63410	1996 bp downstream