rs30949697 SNP Detail

Summary

• ID
  rs30949697
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57251952 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACAACTCAG TGTTTAGCCA AGCCCAAATA
  CCCTGCTGCC AGCATTTCAA AGTCAACACT GGTATCTAAA ATCAACACTG GCTGACTAAC
  ACACACCGGT ACTTTCACGA AAACATATTG TGAAATAACC CTTTGCCTAC AAAAAAAAAT
  Y
  CCTCCTGTGT TTTCTGATCA CGGTTCATTA TTCAGAACAA TGCTGAATCC TTAATTGTTT
  TCAAAGCAAT GAGTTCAATG ATCTTTTTGT TGCTTGTTTG TGGCCAGTTA CTCTAACaga
  accataaagg agctgaaatc tggcctgctc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45483288	mCV22953201	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss320780342	CHEV_3_57148453	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30949697					SNP	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57251952 () rs orientation: forward

Symbol	Name	Function Class
Gm56807	predicted gene, 56807	within coordinates
Rr577088	regulatory region 577088	1248 bp distal
Rr577089	regulatory region 577089	within coordinates