rs30950829 SNP Detail

Summary

• ID
  rs30950829
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:95031392 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAG AAATCTGCCT GTCTCTGCCT
  Y
  CCAAGTGCTA CGATTAAAGG CATGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45483402	mCV24559510	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss135510029	ENSMUSSNP6272864	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss320841119	CHEV_3_94928003	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30950829					SNP	C	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95031392 () rs orientation: forward

Symbol	Name	Function Class
D3Umi9	DNA segment, Chr 3, University of Michigan 9	1440 bp distal
Rr580819	regulatory region 580819	223 bp proximal
Rr580820	regulatory region 580820	445 bp proximal
Tmod4	tropomodulin 4	mRNA-UTR
Tssr967	transcription start site region 967	356 bp upstream
Tssr30490	transcription start site region 30490	1549 bp downstream
Tssr30491	transcription start site region 30491	370 bp upstream
Tssr30492	transcription start site region 30492	401 bp upstream
Vps72	vacuolar protein sorting 72	1030 bp downstream