rs30952329 SNP Detail

Summary

• ID
  rs30952329
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:83485976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAAAGGCA GGTCATCATG
  CCTATCTATT TCTTTTTTAT TTTGGATTTA TAGAGTGAAT TAATGAACCA AACCATCTTT
  ATCTAGTTAC CTGCCAGTTA CTCTGATGCC ACTATTGATA ATGATCTTTT TATCCTTTTT
  ATACTTATTA TATGCTATGC CATTCATAAG AATTAATCAG GCTGGGTATG ATAATAATAA
  W
  AATCACTGCA CCCTTGGAGG TAGAAGCAGG GCAATTAAGA GTTCAGGGTA TTTTCAACTA
  CAAAAGGAAT TTGAAGTCAA GCCTGGGCTA CACAAGACCT GGTCTGATTT TTTTTTTTTC
  AGAATCTCTT TGGTTCTATT CTAAATTCCT AAGAGAAAGA GCCTGCAGCA TGAAGCTAGG
  GTTTTATAGA ACAAACAAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45981558	mCV27581726	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30952329					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83485976 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17605	CpG island 17605	1608 bp distal
Rr399724	regulatory region 399724	1816 bp downstream
Rr632885	regulatory region 632885	1535 bp distal
Rr632886	regulatory region 632886	542 bp proximal
Rr632887	regulatory region 632887	1409 bp proximal
Tssr1908	transcription start site region 1908	1888 bp downstream