rs30953944 SNP Detail

Summary

• ID
  rs30953944
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171485920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAC AAAACCAAAG TTGTAAACTG
  K
  ATTATTCAAA TACTGGGTAG GTGTG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss44981143	mCV24408148	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
ss120001833	PARCsnp_1.14994	PARC_SEQ	INBRED	f	SNP		T	G
ss120004130	PARCsnp_1.04333	PARC_SEQ	INBRED	f	SNP		T	G
ss146171777	ENSMUSSNP6630461	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320120209	CHEV_1_173588483	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30953944					SNP	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171485920 () rs orientation: forward

Symbol	Name	Function Class
Gm70589	predicted gene, 70589	1941 bp downstream
Rr423376	regulatory region 423376	157 bp proximal
Rr423377	regulatory region 423377	555 bp proximal