rs30955042 SNP Detail

Summary

• ID
  rs30955042
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:191313008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGG TTATAGATTA TTGATTGGAA
  K
  CTCTTCTTTT CCTAACATGA GTATT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44981071	mCV23578139	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	G	G
ss146508272	ENSMUSSNP2308658	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30955042					SNP	G	T	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191313008 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ints7	integrator complex subunit 7			Intron
				Noncoding-Transcript-Variant
Rr426190	regulatory region 426190			990 bp distal