rs30955937 SNP Detail

Summary

• ID
  rs30955937
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63405313 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATGCTGTC ACACAGGGAG
  CAGGGATCAT ACTTTTTAGT GTTTTAGAAA ACAAAAACCA CAAGCCTGGA TTAGGACCCC
  AGGATTCCTT AGCAACTATT CTTAAGCAAC ACAGCCGAAT GAATATATAA ACCAAATGAG
  GCAAATGAAG CCTCGCTCTC AATCAAATCA GGCTCTGCTG CCAAATAATG TTCAGTTAGC
  Y
  ACCAATACTT GGGAAGCTGA GGTGAAAGAT GAAGAAGTTA GAGAAGCGAT CTAGGCTAAA
  CTCCAAGGCC TTCTAGCATA AAGGAAACCA ACAAAAAGAA ACAAAACCCC TTTCATTCCC
  AGCCTGGAGC TGGCAGGTTT TGACTAAGGC CCCGTAGCTC TGTACTATCT TACAGATGAT
  CAAGAAACAC AGATACTAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss49188713	NES12498454	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs30955937					SNP	T	T	T	T	T	C	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49188713	NES12498454	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63405313 () rs orientation: forward

Symbol	Name	Function Class
Fdft1	farnesyl diphosphate farnesyl transferase 1	within coordinates
Gm53861	predicted gene, 53861	within coordinates
Gm62779	predicted gene, 62779	442 bp upstream