rs30955943 SNP Detail

Summary

• ID
  rs30955943
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63404626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACATGAGGA GCTGTATTAA
  AGGGTCACAA CATTAGGAAG GTCGGGACCC ACTGGTCTAG CGTCTGCTCT CAAGGTATGC
  AAAGGGACAA TGGCCCTGGG TTTGAAGAAC AGGCTTAGGG GAGCACTCTC CACCCCAACA
  CCCGAAACAG ACAAGCAGCA GGTCTTGTCC GCAGCACTTC TGTTTCGTTT CTGTTTCAGC
  R
  TGTCACCTTA AACAACAGGT CCCTAGAATG ACCAAGAAGA ATCCTAATGA GGACAGGACT
  GCTCTCTGAG TGGAAAGTTC TCATGGCCGG GGACTCCCAG TATGTCACAG CTACTGTCCC
  TAGAGTCTCC CAGCTTTTCA CTGCTGCCTG AAGCTATGTA CACACCCTTA ACTCTCCAGT
  GAGGGCAACA GGGCTCAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49188719	NES12498449	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30955943					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49188719	NES12498449	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63404626 () rs orientation: forward

Symbol	Name	Function Class
Fdft1	farnesyl diphosphate farnesyl transferase 1	within coordinates
Gm53861	predicted gene, 53861	within coordinates
Gm62779	predicted gene, 62779	1129 bp upstream
Rr297363	regulatory region 297363	1625 bp distal