rs30956587 SNP Detail

Summary

• ID
  rs30956587
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127540809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAGATGGGA ATTGTAGAGG GATTAGGTGA CTGAGACAGG
  GGTTGGATAT AAGCACTGGA GCAAGGGGCC AGAGAGAGCG CCCCCCTCAG GAGGGAGGAG
  R
  GAGAGCACCT TGAATACCTG GCTGCAGAAC AAAGCTTGGC TCACCCTTCT TCCAGCTTTC
  TCCTTTAAGC ACAATTCTGC TCCCCTTCCC CTCAGGTGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss46462256	mCV22734970	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147734696	ENSMUSSNP2327719	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs30956587					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127540809 () rs orientation: forward

Symbol	Name	Function Class
Myo1a	myosin IA	230 bp upstream
Rr213603	regulatory region 213603	within coordinates
Rr221966	regulatory region 221966	1636 bp proximal
Tssr3395	transcription start site region 3395	341 bp upstream
Tssr96244	transcription start site region 96244	1423 bp downstream
Tssr96245	transcription start site region 96245	1388 bp downstream
Tssr96246	transcription start site region 96246	1854 bp upstream
Tssr96247	transcription start site region 96247	1872 bp upstream