rs30956910 SNP Detail

Summary

• ID
  rs30956910
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:151837184 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGTCACCTAA GACCATTGGA AAGCACAGAT ATTTACATTA TGATTCATAA CAATAGCAAC
  ACTACAGTTT CGAAGCAGCA ATAAAATAAT TTTAGGTTTG GGAGTCACCA CAACAGGAGT
  AACTGGACTA AAGGCCACTG GTCTATAGGC ATCTGATGGA GGCACTTTCT CAGCATAGGT
  TCCTCTTCCC AGATAACTCT AGCTTGTATA AAGCTGACGA AAGAAAGAGA GAAGGAAGGA
  AGGAAGGAAG GAAGGAAGGA AGGAAGGAAG GAAGGAAGGA AAGAAAGAAG AAAAGAGAAG
  R
  GAAGGGAAGG GAAGGGAAGG GAAGGGAAGG GAAGGGAAGG GAAGGGAAGG GAAGGAAAGG
  AAAGGAAAGG AAAGGAAAGG AAAGGAAAGG AAAGGAAAGG AAAGGAAAGG AAAGGAAAGG
  AAAGGAAAGG AAAGAACAAG TAAGAATGAG CAATATCTCG GTCAGCGCAA GTGTTGGCTA
  TGTCTGCAAG CATGGGTATA TAAAGTCCAG GAGTGGTGTG TGTGTGTGTC TAATCCCAGC
  TTGGAGAGGC TGAAGCAAGA GGACTCCTGG AACTTGCCCA GATCCCAGTG AGAGATCCTG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45483868	mCV23509596	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs30956910					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151837184 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gipc2	GIPC PDZ domain containing family, member 2			Intron
				Noncoding-Transcript-Variant
Rr587462	regulatory region 587462			133 bp distal
Rr587463	regulatory region 587463			1986 bp proximal