rs30957012 SNP Detail

Summary

• ID
  rs30957012
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71246193 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCA ACTTCCTTTC TACTTGGTGC
  Y
  AAAGTTCATT TAGGGCATAA GATTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45982871	mCV22321286	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss133274939	ENSMUSSNP541961	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
ss321817308	CHEV_6_71219203	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30957012					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71246193 () rs orientation: forward

Symbol	Name	Function Class
Rr136432	regulatory region 136432	within coordinates
Rr146429	regulatory region 146429	1007 bp proximal
Rr150236	regulatory region 150236	1193 bp distal
Rr379579	regulatory region 379579	within coordinates
Rr379580	regulatory region 379580	1512 bp upstream
Tssr56988	transcription start site region 56988	1665 bp upstream
Tssr61348	transcription start site region 61348	1505 bp downstream
Tssr61349	transcription start site region 61349	1522 bp downstream