rs30957778 SNP Detail

Summary

• ID
  rs30957778
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050516 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TATGGCAAGA AAATTGAAAA ACATGGGAAA ATGAGAAACA TCCACTTGAC GACTTGAAAA
  ATGACGAAAT CAATGAAAAA CTTGAAAAAT GAAAAATGCA CACTGTAGGA CCTGGAATAT
  GGCGAGAAAA CTGAAAATCA CGGAAAATGA GAAATACACA CTTTAGGACG TGAAATATGG
  CGAGGAAAAC TGAAAAAGCT GGAAAATTTA GAAATGTCCA CTGTAGGATA CGGAATATCG
  CAAAAAAACT GAAAATCAAG GAAAAATGAG AAACATCCAA TTGACGACTT GAAAATTGAC
  R
  AAATCAATGA AAAACGTGAA AAATTAGAAA TGCACACTGT AGGACCTGGG ATATGGCGAG
  AAAACTGAAA ATCACTGGAA AATGAGAAAT ACACACATTA GGACATGAAA TATGGCGAGG
  AAAACTGAAA AAGGTGGAAA ATTTAGAAAT GTCCACTGTA GGACATGGAA TATGGCAAGA
  AAACTGAAAA TCGTGGAAAA TGAGAAACAT CCACTTGACG ACTTGAAAAA TGACGAAATC
  AATGGAAAAC GTGAAAAATG AAAAATGCGC ACTGTAGGAC CTGGAATATT GCGAGAAACT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss46462616	mCV25368122	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs30957778					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050516 () rs orientation: forward

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1810 bp downstream
Tssr4285	transcription start site region 4285	1785 bp upstream
Tssr4286	transcription start site region 4286	1681 bp downstream
Tssr4287	transcription start site region 4287	1646 bp upstream
Tssr4288	transcription start site region 4288	1618 bp downstream
Tssr4289	transcription start site region 4289	1523 bp upstream
Tssr4290	transcription start site region 4290	1516 bp downstream
Tssr4291	transcription start site region 4291	1436 bp upstream
Tssr4292	transcription start site region 4292	1400 bp downstream
Tssr4293	transcription start site region 4293	1365 bp upstream
Tssr4294	transcription start site region 4294	1363 bp downstream
Tssr4295	transcription start site region 4295	1290 bp upstream
Tssr4296	transcription start site region 4296	1327 bp downstream
Tssr4297	transcription start site region 4297	1263 bp upstream
Tssr4298	transcription start site region 4298	1245 bp downstream
Tssr4299	transcription start site region 4299	1205 bp downstream
Tssr4300	transcription start site region 4300	1167 bp downstream
Tssr4301	transcription start site region 4301	1149 bp upstream
Tssr4302	transcription start site region 4302	1137 bp upstream
Tssr4303	transcription start site region 4303	1082 bp downstream
Tssr4304	transcription start site region 4304	1053 bp upstream
Tssr4305	transcription start site region 4305	984 bp downstream
Tssr4306	transcription start site region 4306	965 bp upstream
Tssr4307	transcription start site region 4307	944 bp downstream
Tssr4308	transcription start site region 4308	912 bp upstream
Tssr4309	transcription start site region 4309	868 bp upstream
Tssr4310	transcription start site region 4310	821 bp downstream
Tssr4311	transcription start site region 4311	793 bp upstream
Tssr4312	transcription start site region 4312	713 bp downstream
Tssr4313	transcription start site region 4313	654 bp upstream
Tssr4314	transcription start site region 4314	642 bp downstream
Tssr4315	transcription start site region 4315	618 bp downstream
Tssr4316	transcription start site region 4316	591 bp upstream
Tssr4317	transcription start site region 4317	515 bp downstream
Tssr4318	transcription start site region 4318	491 bp upstream
Tssr4319	transcription start site region 4319	434 bp upstream
Tssr4320	transcription start site region 4320	370 bp downstream
Tssr4321	transcription start site region 4321	342 bp upstream
Tssr4322	transcription start site region 4322	243 bp downstream
Tssr4323	transcription start site region 4323	208 bp upstream
Tssr4324	transcription start site region 4324	178 bp downstream
Tssr4325	transcription start site region 4325	127 bp downstream
Tssr4326	transcription start site region 4326	89 bp upstream
Tssr4327	transcription start site region 4327	86 bp downstream
Tssr4328	transcription start site region 4328	4 bp downstream
Tssr4329	transcription start site region 4329	6 bp upstream
Tssr4330	transcription start site region 4330	97 bp upstream
Tssr4331	transcription start site region 4331	121 bp downstream
Tssr4332	transcription start site region 4332	227 bp downstream
Tssr4333	transcription start site region 4333	239 bp upstream
Tssr4334	transcription start site region 4334	261 bp downstream
Tssr4335	transcription start site region 4335	408 bp downstream
Tssr4336	transcription start site region 4336	412 bp upstream
Tssr4337	transcription start site region 4337	485 bp downstream