rs30962630 SNP Detail

Summary

• ID
  rs30962630
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:34081383 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTGTGGTG ATTCATTGAA
  ATCCTGAAAC CAGGAAGATA TAATCCTGGT TCCTTCTGCT GCAGACCCAA AGGAAATGGA
  AAGGCTGTCT CAAAAAATAC CCATACCCCT ATGTTCTCTG CAGCATTAGC CACAATAGTC
  AAGATGGAAA CAGCCAGATG TCCGTCAAGG AAGGGTGTCT TAGCTGGGTG TGATGCTGCA
  W
  GTTTGCAGTC CCGAACTCGG GAAGCAGGAA TATCAGGAGT TCAAAGTCGA GCCTCAGCTA
  CATAATGAGC TCAAGGCTAG CACGGGTATG TGAGACTCGG TCTCAAGAGA AAGAAAGAAA
  CAAACAAACA GAATCAACCA AACAACTAAA ACCAAGCAAC AAAAAGTAGC TAACAAGAGT
  TTACTATGTA TGCACAACAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss39239680	mCV25203053	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
ss139269701	ENSMUSSNP6575772	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30962630					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:34081383 () rs orientation: forward

Symbol	Name	Function Class
Tssr128062	transcription start site region 128062	1162 bp upstream
Tssr128063	transcription start site region 128063	358 bp upstream