rs30963153 SNP Detail

Summary

• ID
  rs30963153
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:30167112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCT TGAAACCTTG ACCTAGAGTG
  W
  GTCCCCAGTG GGGACACAAG CAGGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45984018	mCV24692362	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T	A
ss133095111	ENSMUSSNP3833001	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss321776200	CHEV_6_30117113	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30963153					SNP	A	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:30167112 () rs orientation: forward

Symbol	Name	Function Class
Mir182	microRNA 182	1121 bp upstream
Mirc35	microRNA cluster 35, including Mir182 through Mir183	within coordinates
Mirc35hg	microRNA cluster 35, host gene	within coordinates
Rr627709	regulatory region 627709	within coordinates
Rr627710	regulatory region 627710	1957 bp proximal