rs30963185 SNP Detail

Summary

• ID
  rs30963185
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr19:4880402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGT CTCCATGTGG GTCCCCTAAC
  K
  ACTGGGGCAA AGACTCTCCC TAAAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss44982233	mCV25314756	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30963185					SNP	G	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:4880402 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ccs	copper chaperone for superoxide dismutase			Intron
				Noncoding-Transcript-Variant
Gm59022	predicted gene, 59022			430 bp downstream
Rr542851	regulatory region 542851			854 bp distal
Tssr157516	transcription start site region 157516			1732 bp upstream