rs30964251 SNP Detail

Summary

• ID
  rs30964251
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:118623788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTGGTTTC ATTTTGAAAC
  AGTCATTTGC TGTATTCAGA GGGAAAACGT CTATAGTTAC CAGATGCAAA GAAAATCCAT
  CATTCATGAT ACATACGTGT AGGTTGGACA CACACACACT TTACATTGTT TTTGCAGAAC
  ACTAAATAAC CTCGAATCTT CCACTTAGCC CAGAGAAAAA CCCCCTACAG CAGATGCTCG
  M
  GAGTGGTTTC ATGCCCATTG CTTTCTGCAG TCTATGAGAC TGACAGTTAC CTATGGTTAA
  TTTGTTATCA ATGGAGTCTA TGTTAGCAAA AGAAAATATC ATCCAAATTG TACCATAAAA
  CTTTTTTTAT GATTAAATAA TTTCTGTCTA GATACCCTGA TGAAAATTCC TGTTATTAAA
  AAAACAAAAC CAAAAACCAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46464303	mCV22548736	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	A
ss138901150	ENSMUSSNP3467506	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30964251					SNP	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:118623788 () rs orientation: forward

Symbol	Name	Function Class
Gm31626	predicted gene, 31626	1649 bp upstream
Rr387829	regulatory region 387829	within coordinates
Rr474253	regulatory region 474253	within coordinates
Rr474254	regulatory region 474254	770 bp proximal
Rr474255	regulatory region 474255	1281 bp proximal