rs30965134 SNP Detail

Summary

• ID
  rs30965134
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:128070509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGGTGGGTA GAGTCTCTGT CATCGGCAGA TGGTGAAGGG
  GCTTCGGAAT AAACCCTCAG AGCCCCAAAA TACCTCTTCC ATCTGCGTAC TCCTGCCAAG
  R
  ATTCCTCCAT GGGGAGGGGG TCAGCTTTGA TTCTATGGTC AAAAATAGGC CTGAAACCAT
  AAACCTGTGG ACTGGGGCGG GGGGACCCAC CATGTACAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45983358	mCV22306005	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss133637221	ENSMUSSNP5882814	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss321943864	CHEV_6_128043564	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30965134					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:128070509 () rs orientation: forward

Symbol	Name	Function Class
Gm55163	predicted gene, 55163	1371 bp downstream
Rr639177	regulatory region 639177	1386 bp distal
Rr639179	regulatory region 639179	1849 bp distal
Rr639180	regulatory region 639180	459 bp distal
Rr639181	regulatory region 639181	1636 bp proximal
Rr639182	regulatory region 639182	1844 bp proximal
Tspan9	tetraspanin 9	within coordinates