rs30965358 SNP Detail

Summary

• ID
  rs30965358
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63309110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTCCTTC CTTCCTTCCT
  TCCTTCCTCC CTCCCTCCCT CCCTCCCTTC CTTTCTTCCT TCTTCCCTCC CTTTTTTTCT
  TCCTTCCTTC CATCCTTCCT TCCTAAAGTT ATTTCCTCCC GTGCTCATCT GGTGCACTGA
  GAATGGACTA ATGCAGGGAC CACAGCAGCA CCAGCTCCGG GTTATCAGCA GCAGCACAAG
  R
  ACCAAGCCCA GAAGCCACGA ACCCCTCCTG CTCTGCATCA GGTGAGAACC CATGCGGATT
  CTCTGAATGC TTTCTCCAGG ACTCTTTTTC AGAGTGGTTT TTCCTCTTAC CTCTGTAAAT
  CCCACCTTCC CCTCCATTGA CCCCTGAATC ATCTGTTCCT CAGACTTGTG CTCACTGCTT
  TTCTCCAGCC CCATCCCTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49189375	NES12485106	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30965358					SNP	G	G	G	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49189375	NES12485106	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63309110 () rs orientation: forward

Symbol	Name	Function Class
Gm35908	predicted gene, 35908	within coordinates
Tssr129127	transcription start site region 129127	1015 bp upstream