rs30966127 SNP Detail

Summary

• ID
  rs30966127
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63307449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGAGCAG CCAGTGCTCT
  TAACTCTGAG CCACATGGAG TTGCTGGAGT CTCAGGTAAA GGTCTTATGA CCCTCCTCCA
  CAGGTTGAAT CAGGAGGGTC TCTTGTGAGT AACCACAGCT CCTCTGATTA AGATAGTAAT
  AGCTGATGTG CTGATGTGCT CGAAGCACAG CGTTCCACAA CAGTGATGCA GCCACAACAT
  Y
  ACAGAGGAGT CAGACTAGCA TTCACAGAGA GATCCAGCAG CAGACAGTGG TGACAGCCAC
  CAACGCCATC ATCACCTTTT CCAGTCGCCC TCTGACTTTG GTGAAGGTGT TTCAAAAGCA
  GGAGGCTTTA GCCTCTGAGC TAGGAGGAGA CATGACTTAA CCTCCGGCCA CGCAGAGGCC
  ACACACATCG TTTGGGGGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49189385	NES12485156	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30966127					SNP	C	C	C	C	C	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49189385	NES12485156	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63307449 () rs orientation: forward

Symbol	Name	Function Class
Gm35908	predicted gene, 35908	817 bp upstream
Tssr129127	transcription start site region 129127	643 bp downstream