rs30967865 SNP Detail

Summary

• ID
  rs30967865
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050428 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  TGGACATTTC TAATTTTCTA ACTTTTTCAG TTATCCTCGA CATATTTCAC GTCCTAAAGT
  GTGTATTTCT CATTTTCCGT GTGTTTCAAT TTTCTCGCAT TATTCCAGGT CCTACAGTGT
  ACATTTCTCA TTTTTCATGT TATTTCAGTG ATTTTGTCAT TTTTCAAGTC GTCAAGTGGA
  TGTTTCTCAT TTTCCATTAT TTTCAGTTTT CTTGCCATAT TCCATGTCCT ACAGTGGACA
  TTTCTAAATT TTCCACCTTT TTCATTTTTC CTCGCCATAT TTCATGTCCT AAAGTTTTTT
  K
  TCCTCATTTT CCGTGATTTT CAGTTTTCTC ACCATGTTCT AGGTCCTACA CTGTGCATTT
  CTCATTTTTC ACGTTTTTCA GTGATTTCGT CATTTTTCAA GTCGTCAAGT GGATGTTTTA
  CATTTTCCAT GATTTTCAGT TTTCTTACGA TATTCCATGT CCCACAGTGG ACATTTCTAT
  ATTTTGCACC TTTTTCAGTT TTCCTCACCA TATTTTATGT CCTAAATTGT GTATTTCTTA
  TTGTCCGTGA TTTTCAGTTT TCTCGCCATA TTCCAGGTCC TACAGTGTGC ATTTCTCATT
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss46462878	mCV23560338	ABI	CRAMUS_MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30967865					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050428 () rs orientation: reverse

Symbol	Name	Function Class
Tssr4284	transcription start site region 4284	1898 bp downstream
Tssr4285	transcription start site region 4285	1873 bp upstream
Tssr4286	transcription start site region 4286	1769 bp downstream
Tssr4287	transcription start site region 4287	1734 bp upstream
Tssr4288	transcription start site region 4288	1706 bp downstream
Tssr4289	transcription start site region 4289	1611 bp upstream
Tssr4290	transcription start site region 4290	1604 bp downstream
Tssr4291	transcription start site region 4291	1524 bp upstream
Tssr4292	transcription start site region 4292	1488 bp downstream
Tssr4293	transcription start site region 4293	1453 bp upstream
Tssr4294	transcription start site region 4294	1451 bp downstream
Tssr4295	transcription start site region 4295	1378 bp upstream
Tssr4296	transcription start site region 4296	1415 bp downstream
Tssr4297	transcription start site region 4297	1351 bp upstream
Tssr4298	transcription start site region 4298	1333 bp downstream
Tssr4299	transcription start site region 4299	1293 bp downstream
Tssr4300	transcription start site region 4300	1255 bp downstream
Tssr4301	transcription start site region 4301	1237 bp upstream
Tssr4302	transcription start site region 4302	1225 bp upstream
Tssr4303	transcription start site region 4303	1170 bp downstream
Tssr4304	transcription start site region 4304	1141 bp upstream
Tssr4305	transcription start site region 4305	1072 bp downstream
Tssr4306	transcription start site region 4306	1053 bp upstream
Tssr4307	transcription start site region 4307	1032 bp downstream
Tssr4308	transcription start site region 4308	1000 bp upstream
Tssr4309	transcription start site region 4309	956 bp upstream
Tssr4310	transcription start site region 4310	909 bp downstream
Tssr4311	transcription start site region 4311	881 bp upstream
Tssr4312	transcription start site region 4312	801 bp downstream
Tssr4313	transcription start site region 4313	742 bp upstream
Tssr4314	transcription start site region 4314	730 bp downstream
Tssr4315	transcription start site region 4315	706 bp downstream
Tssr4316	transcription start site region 4316	679 bp upstream
Tssr4317	transcription start site region 4317	603 bp downstream
Tssr4318	transcription start site region 4318	579 bp upstream
Tssr4319	transcription start site region 4319	522 bp upstream
Tssr4320	transcription start site region 4320	458 bp downstream
Tssr4321	transcription start site region 4321	430 bp upstream
Tssr4322	transcription start site region 4322	331 bp downstream
Tssr4323	transcription start site region 4323	296 bp upstream
Tssr4324	transcription start site region 4324	266 bp downstream
Tssr4325	transcription start site region 4325	215 bp downstream
Tssr4326	transcription start site region 4326	177 bp upstream
Tssr4327	transcription start site region 4327	174 bp downstream
Tssr4328	transcription start site region 4328	92 bp downstream
Tssr4329	transcription start site region 4329	94 bp upstream
Tssr4330	transcription start site region 4330	9 bp upstream
Tssr4331	transcription start site region 4331	33 bp downstream
Tssr4332	transcription start site region 4332	139 bp downstream
Tssr4333	transcription start site region 4333	151 bp upstream
Tssr4334	transcription start site region 4334	173 bp downstream
Tssr4335	transcription start site region 4335	320 bp downstream
Tssr4336	transcription start site region 4336	324 bp upstream
Tssr4337	transcription start site region 4337	397 bp downstream