rs30969730 SNP Detail

Summary

• ID
  rs30969730
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:21788960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CATTGCCTAT ATGTTAAGAA CAAGTACCAC TTTGGGTTTC AGGTATACAG AGTTCTAAAA
  TGATATTTTT TAGGAAGCTA CAGTATCCTT AAAAATTGTT GAAGTTTTTA TGAACCAGGC
  CTGAATCATG CCTCTGGCTT CTAAACCGTG GGTTATTTTT GGCTATGTGG AGACAACTTT
  TATCAATATT AGAAAAAGTT AGTCAGAGAC AGAATGGGTA GGATGAAAAG AAGGGCATCC
  CACATGATAA CCTGCATGTA ATCTGCAGTG TCTACAGTGG TATAGGACAA AATACAGTTT
  Y
  GATAGAGAAA GTGTGCATGT CTAATGACTG CAGTGTGCTC TACAAGGTAC ACTCAAGTGA
  CTTACCCTAC AGCTTTCAAG GGCCTAATGC AGCTTGGCAG AGATATCCAA GATAAATAAA
  GATGTTGGTA GGCAGTCTTG AAGCAGGGAT TCCAGTGACG TTACATGGTA TGAAGAGTCT
  GGCTATAAAT CATCACACAT TCCTTCAGGG AAAACCATGT CCTGATGAAA GGACAACAGT
  GCTGGTGACC TCTAGATTGC AGGTTCTAGT AGCACAGATG GTGTGGGTTC CCAAAAAACA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46464462	mCV24381215	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs30969730					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:21788960 () rs orientation: forward

Symbol	Name	Function Class
Defa5	defensin, alpha, 5	569 bp downstream
Gm65300	predicted gene, 65300	within coordinates