rs30970392 SNP Detail

Summary

• ID
  rs30970392
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:20707503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAAT AATTACTACT ACTACTACTA
  M
  TAATAATAAT AATAATAGGG GCTGG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39240249	mCV23218614	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	A
ss139195087	ENSMUSSNP114662	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30970392					SNP	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:20707503 () rs orientation: forward

Symbol	Name	Function Class
Myoz1	myozenin 1	895 bp upstream
Rr488338	regulatory region 488338	777 bp distal
Rr488339	regulatory region 488339	951 bp proximal
Rr488340	regulatory region 488340	1057 bp proximal
Synpo2l	synaptopodin 2-like	1511 bp downstream
Tssr127644	transcription start site region 127644	927 bp upstream