rs30970708 SNP Detail

Summary

• ID
  rs30970708
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63143686 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCATGATT CCTCCTGGGA
  GAGAAAGATG GGAATCGGAA AGAACGTTTT TCTGTAATTA GTGCTGGCTC CCTCTAGATA
  AATGGTGCAC TGGCTAGGTC ACAGGTCATG ATAGTGGTGG CTGAGCTGGC TTCCGTAACC
  CTGCATAGAC AGATTTCTGA GTATTGTTCC AGGCAGAGTT CTTATTACTA CAAGGACAGC
  Y
  CAACTACTAG GAGCCATGTA GAGTGTTTAC AAGGGAATTG GAAGCATTTG GGCAAATGTA
  TGTTTAGCCA TTGTTTTTAA GGAAGGAGGG AAGAATTTAT AAACATTTAT CTTAACGATG
  TTTTGAGTAG CTTTTTCTTA TTAGTGCTTG CCATAGATTG TTAGGAGTCT ACACTGACTA
  CACCCTACAC CATCACACCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49190027	NES12491923	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30970708					SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49190027	NES12491923	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63143686 () rs orientation: forward

Symbol	Name	Function Class
Rr299801	regulatory region 299801	1716 bp proximal
Tssr126031	transcription start site region 126031	620 bp upstream
Wdfy2	WD repeat and FYVE domain containing 2	within coordinates